Kulik Research Group

Congratulations to Heecheol on his contribution to the latest MONET collaboration on incorporating mechanophores to improve the properties of polymers in Nature! Read more about it here and at MIT News !

Congratulations to Elizabeth Sebastian on receiving a Henry C. (1926) and Frances Keany Rickard Fund Fellowship from the MIT Office of Graduate Education!

Mechanophores offer unique opportunities in chemistry and material science, yet current mechanophores are often limited by low reactivity, irreversible transformation, or poor thermal stability. Here, we report the computational discovery of a new class of Cu 2+ complex mechanophores comprising two tridentate scorpionate ligands that reversibly switch from octahedral to square-planar coordination…

chemistrymaterialsmaterials-sciencephysical-chemistry

The direct air capture (DAC) of carbon dioxide from the atmosphere requires sorbents that combine strong adsorption at dilute CO2 conditions with resistance to competitive H2O adsorption and robust structural stability. In this work, we present a stability-aware, multiobjective computational framework that integrates machine learning (ML) and evolutionary algorithm (NSGA-III) optimization to iden…

chemistrycomputational-chemistryenvironmental-chemistrymaterials

Diffusion-based deep generative models have emerged as powerful tools for inverse materials design. Yet, many existing approaches overlook essential chemical constraints such as oxidation state balance, which can lead to chemically invalid structures. Here we introduce CrysVCD (Crystal generator with Valence-Constrained Design), a modular framework that integrates chemical rules directly into the…

chemistrycomputational-chemistrymaterialsmaterials-science

We present the Boston Open-Shell Transition Metal Complex (BOS-TMC) dataset, a set of density functional theory (DFT) properties for 159k experimentally characterized mononuclear transition metal complexes (TMCs) in multiple spin states with a range of formal charges derived from the Cambridge Structural Database (CSD). To curate this set, we carried out an iterative procedure to confidently assi…

chemistrycomputational-chemistryinorganic-chemistry

Understanding ligand properties is essential for computational high-throughput screening of transition metal complexes. However, ligand properties such as net charge and other information such as their application area are often absent or inconsistently recorded in crystallographic datasets. Here, we construct a ligand dataset from 126,985 mononuclear transition metal complexes curated from the C…

chemistrycomputational-chemistryinorganic-chemistry

Bile salt hydrolases (BSHs) are gut microbial enzymes that catalyze the deconjugation of glycine-or taurine-conjugated bile acids (BAs), a key step in shaping the BA pool in the human gastrointestinal tract and modulating host-gut microbiome interactions.1–3 All known BSHs are members of the N-terminal nucleophile (Ntn) hydrolase superfamily and share a conserved architecture and mechanism involv…

biochemistrybiologymicrobiology

Congratulations to David, Weiliang, and the rest of the team on the acceptance of their manuscript describing QuantumPDB in JCIM! Read more about it here !

chemistrycomputational-chemistry
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